Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTCATTACTGCAGCA
.....((((((((((..((((&))))..))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025052
GeneSymbolMAP3K19
Binding site366,385
Score0.923
Seed0
Au0.529
Energy-19.1
Binding len19
Me-13.899
Phylopstem2.2880476333333335
Phylopflank1.4416552499999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure