Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGCGTCGGCGGCTGCT
..((((((((.(.(((((((.&))))).)).).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025054
GeneSymbolVCPIP1
Binding site349,369
Score0.846
Seed1
Au0.324
Energy-22.9
Binding len20
Me-9.071
Phylopstem0.20997645499999998
Phylopflank0.21725989125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure