Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTTCCCTGTGTGCTGGGG
.(((((((((((..........&.))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_025055
GeneSymbolCCDC33
Binding site2679,2697
Score0.846
Seed1
Au0.382
Energy-17.4
Binding len13
Me-6.908
Phylopstem-0.24038799090909083
Phylopflank0.17293662875000002
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure