Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACACGGCTGCAGGAGCAAG
((((..((((((((((..(((&)))..))))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025055
GeneSymbolCCDC33
Binding site2464,2486
Score0.923
Seed0
Au0.426
Energy-23.9
Binding len22
Me-9.958
Phylopstem0.7695748
Phylopflank1.1109723937499998
Longest consecutive pairings10
Position of longest consecutive pairings7
Pairings in 3prime end6
PositionCDS
2D Structure