Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTCCTCTTTGTAACAGGTCATATTTGGCTGCCAGGA
.(((((((..((((((.(((((&.)))))))))).)..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_025057
GeneSymbolBBOF1
Binding site2350,2390
Score0.846
Seed1
Au0.574
Energy-18.5
Binding len23
Me-6.092
Phylopstem6.456828571428573
Phylopflank3.3317624350000004
Longest consecutive pairings10
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure