Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGGGCGGCCGCGGCTGGGC
.(.(((((((((((((..(((&)))...))))))))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025057
GeneSymbolBBOF1
Binding site75,97
Score0.846
Seed0
Au0.279
Energy-27.1
Binding len22
Me-5.351
Phylopstem0.052398823076923076
Phylopflank0.12885405499999997
Longest consecutive pairings13
Position of longest consecutive pairings3
Pairings in 3prime end6
Position5UTR
2D Structure