Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGCACACCGAGCTCAAA
(((.((((.((((((((((..&)))))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025059
GeneSymbolCCDC170
Binding site1773,1792
Score0.846
Seed0
Au0.471
Energy-18.9
Binding len19
Me-8.026
Phylopstem1.602115818181818
Phylopflank3.49386176125
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure