Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCTCCGGCAGAAAATAGCCCAGCTGGAGG
((.((((((.((((((.....&.)))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025059
GeneSymbolCCDC170
Binding site1625,1658
Score0.846
Seed0
Au0.382
Energy-18.8
Binding len17
Me-6.738
Phylopstem2.2414566666666667
Phylopflank3.85690177875
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end3
PositionCDS
2D Structure