Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTTTGGTTGGGGGCCAGGA
.((((((...((((.(((((((&)))))))))))...)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_025061
GeneSymbolLRRC8E
Binding site3061,3082
Score0.846
Seed1
Au0.515
Energy-17.0
Binding len21
Me-9.141
Phylopstem0.35423119999999997
Phylopflank0.36695267499999995
Longest consecutive pairings11
Position of longest consecutive pairings10
Pairings in 3prime end7
Position3UTR
2D Structure