Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCACTGACCGCAGCCGGCC
..((.((((((((((((((((&))))))))...))))))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025078
GeneSymbolSLC66A2
Binding site2156,2180
Score1.0
Seed0
Au0.353
Energy-27.6
Binding len24
Me-9.076
Phylopstem4.5257217999999995
Phylopflank3.9089104724999997
Longest consecutive pairings8
Position of longest consecutive pairings16
Pairings in 3prime end8
Position3UTR
2D Structure