Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCACCTCCATGCCCTGGGCAGCCGCCAAGGACGGCAAGCTGCAC
.(((((((((((((((.(((.&.)))..))))))))...........))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025080
GeneSymbolASRGL1
Binding site972,1020
Score0.962
Seed1
Au0.441
Energy-26.4
Binding len33
Me-3.793
Phylopstem3.4261428846153845
Phylopflank2.027115595
Longest consecutive pairings8
Position of longest consecutive pairings19
Pairings in 3prime end6
PositionCDS
2D Structure