Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACTGCAGCTGCC
..(((((((((((....((((&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025081
GeneSymbolNYNRIN
Binding site630,646
Score0.923
Seed1
Au0.309
Energy-23.5
Binding len16
Me-6.782
Phylopstem2.612521272727273
Phylopflank2.579569801249999
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure