Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGTTTGCAACCATCACTGTCCACCCCGCGAGCTGCGAT
(((((((((((((((((((.(&).)))))))))...............)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025082
GeneSymbolCENPT
Binding site623,661
Score0.846
Seed1
Au0.426
Energy-21.8
Binding len38
Me-3.938
Phylopstem0.2899191228571428
Phylopflank0.37643648337499996
Longest consecutive pairings9
Position of longest consecutive pairings27
Pairings in 3prime end7
Position5UTR
2D Structure