Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACATGGGCAGCTGCT
..((((((((...(((.....&)))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025087
GeneSymbolCWH43
Binding site992,1007
Score0.923
Seed1
Au0.412
Energy-19.1
Binding len15
Me-12.418
Phylopstem2.130538875
Phylopflank2.0171001575
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure