Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCAGCTGCAGGCCAGGGGAGCTCTGTAT
.((((((((((((((((.(((&))).)))))))))))............))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025092
GeneSymbolPGGHG
Binding site778,811
Score0.846
Seed1
Au0.324
Energy-22.7
Binding len33
Me-3.793
Phylopstem0.42795408214285713
Phylopflank1.2419122662499997
Longest consecutive pairings11
Position of longest consecutive pairings18
Pairings in 3prime end7
PositionCDS
2D Structure