Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGTTCACAAGCACAAAGAAGGTGTAGGGGGAGGCAAGTGCCAGGCACAAGCAGGGG
...((((((.(((((((((((&.)))....))))))))...............)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_025099
GeneSymbolCTC1
Binding site4318,4376
Score0.846
Seed0
Au0.397
Energy-25.5
Binding len38
Me-7.757
Phylopstem2.6482407466666666
Phylopflank0.8136960975
Longest consecutive pairings8
Position of longest consecutive pairings22
Pairings in 3prime end8
Position3UTR
2D Structure