Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCCTACCAGCAGTTCCGTGGCCTTAGGCGGGTGATGCGAC
(((((((((((((.(((((((&)))))))..))).))))).....................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025099
GeneSymbolCTC1
Binding site1164,1209
Score0.846
Seed1
Au0.397
Energy-21.2
Binding len45
Me-4.794
Phylopstem-0.9164726685714287
Phylopflank-0.6338805175000001
Longest consecutive pairings7
Position of longest consecutive pairings38
Pairings in 3prime end7
PositionCDS
2D Structure