Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTTGCTATACAATTGCAGTGTAAA
(((((.(((((((((((.(((&.))).)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025103
GeneSymbolIFT74
Binding site4928,4955
Score0.885
Seed0
Au0.676
Energy-20.9
Binding len22
Me-5.839
Phylopstem-0.2652297727272728
Phylopflank0.14060998374999994
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure