Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCGGCCGAAAACGCCAAGAGATTGATGCTGTAGCTGCC
..((((((((((((((..(((&))))))))).......................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025104
GeneSymbolDBF4B
Binding site8,49
Score0.846
Seed1
Au0.441
Energy-19.7
Binding len41
Me-4.957
Phylopstem-0.11656752756756754
Phylopflank0.24514336150000005
Longest consecutive pairings9
Position of longest consecutive pairings32
Pairings in 3prime end6
Position5UTR
2D Structure