Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCATCCTCCGTGGCTGCC
..((((((((((..(..(((.&)))...)..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025106
GeneSymbolSPSB1
Binding site1277,1297
Score0.923
Seed1
Au0.412
Energy-20.5
Binding len20
Me-7.336
Phylopstem-0.5687024
Phylopflank-0.13010018625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure