Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCACACTCAAGGAGAAGGGGCACCTGCTGCGGCTGCC
..(((((((((((((((((((&))))).)))....................))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025108
GeneSymbolTEDC2
Binding site618,659
Score0.846
Seed1
Au0.397
Energy-24.0
Binding len41
Me-4.957
Phylopstem0.49604980750000005
Phylopflank0.20090741375000004
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure