Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTCTGACAGCTGTGGCTGGAC
.(.(((((((((((((.((((&)).)).))))))))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025112
GeneSymbolZXDC
Binding site1107,1129
Score1.0
Seed0
Au0.529
Energy-21.7
Binding len22
Me-5.351
Phylopstem0.6646639230769231
Phylopflank1.5993245145
Longest consecutive pairings13
Position of longest consecutive pairings3
Pairings in 3prime end7
PositionCDS
2D Structure