Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCCAAGGGGCAGCTGCT
..((((((((((((((.....&)))))).....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025113
GeneSymbolRUBCNL
Binding site7326,7346
Score0.897
Seed1
Au0.412
Energy-22.9
Binding len20
Me-4.957
Phylopstem-0.20215442105263157
Phylopflank-0.057351522499999974
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure