Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATGACAGCAGCTGCT
..((((((((.(((((.....&))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025114
GeneSymbolCEP290
Binding site5478,5493
Score1.0
Seed1
Au0.559
Energy-20.0
Binding len15
Me-7.782
Phylopstem3.9907579749999997
Phylopflank3.4000410737499998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure