Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCTTCTCAGTAGCTGCGAC
(((((((((((((((..((((&)))))))))......)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025124
GeneSymbolTMEM134
Binding site3184,3210
Score1.0
Seed1
Au0.456
Energy-23.4
Binding len26
Me-4.171
Phylopstem0.8378660952380953
Phylopflank1.1727696537499999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure