Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGATGCTGGACGAGCGGCTGCAGCGGCAC
.(((.(((((((((((.....&.))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025128
GeneSymbolMUS81
Binding site541,573
Score0.923
Seed0
Au0.279
Energy-23.0
Binding len17
Me-7.912
Phylopstem2.282365909090909
Phylopflank2.1570083537499998
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end3
PositionCDS
2D Structure