Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCGGCAGCTGATGCAGGTGCGC
.((((.((((((((((..(((&)))..))))))...)))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025128
GeneSymbolMUS81
Binding site1746,1770
Score0.846
Seed0
Au0.353
Energy-21.2
Binding len24
Me-5.694
Phylopstem4.7009286153846155
Phylopflank2.8064014624999998
Longest consecutive pairings6
Position of longest consecutive pairings13
Pairings in 3prime end6
PositionCDS
2D Structure