Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTTGATTGCCAGGG
.(((((((..((((.(......&).))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_025130
GeneSymbolHKDC1
Binding site3419,3435
Score0.923
Seed1
Au0.471
Energy-17.5
Binding len16
Me-6.828
Phylopstem-0.11146785714285719
Phylopflank0.06489400625000002
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end1
Position3UTR
2D Structure