Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGGCACGTGGCTGCC
..((((((((((((((.....&))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025130
GeneSymbolHKDC1
Binding site1111,1127
Score1.0
Seed1
Au0.5
Energy-20.7
Binding len16
Me-4.957
Phylopstem2.4368950866666665
Phylopflank3.5103523875
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure