Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAACCCCACGGCTGCAGT
(((((((((.(((((......&)))))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025130
GeneSymbolHKDC1
Binding site268,286
Score1.0
Seed1
Au0.382
Energy-20.0
Binding len18
Me-5.413
Phylopstem2.823693888888889
Phylopflank4.146083084999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure