Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCTCCCGGGCGCAGCTGCGC
.((((((((((.(((..((.(&).))..))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025137
GeneSymbolSPG11
Binding site138,159
Score0.846
Seed1
Au0.25
Energy-23.4
Binding len21
Me-7.373
Phylopstem0.6697209000000001
Phylopflank0.84951637625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure