Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCAATAGGAGCTGCAT
.(((((((.(.((((.(((((&))))))))).).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025137
GeneSymbolSPG11
Binding site3755,3775
Score0.923
Seed1
Au0.544
Energy-22.6
Binding len20
Me-7.908
Phylopstem2.438487714285714
Phylopflank2.1567467107499994
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure