Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGGGAGGAGGGAGAGGATCA
.((((((.(..((.((((((.&))))))))..).)).)).)).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_025144
GeneSymbolALPK1
Binding site5252,5273
Score1.0
Seed1
Au0.515
Energy-20.9
Binding len21
Me-11.031
Phylopstem-0.4439181666666667
Phylopflank0.20973793750000008
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end6
Position3UTR
2D Structure