Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCATCCTCGCTCGGGACTGTGCGGCTGCGGCGGCT
..((.((((((((((((.(((&.))).)))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025144
GeneSymbolALPK1
Binding site541,580
Score0.846
Seed0
Au0.368
Energy-24.0
Binding len21
Me-9.076
Phylopstem2.377244175
Phylopflank2.6376389112500007
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end7
PositionCDS
2D Structure