Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATACATCTGTAGCTA
....((((((((.((((.(((&))).)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025145
GeneSymbolCFAP43
Binding site1944,1962
Score0.904
Seed0
Au0.574
Energy-19.7
Binding len18
Me-10.836
Phylopstem-0.318231
Phylopflank0.5203911650000003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure