Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAGCCTCCCAAGTAGCTGCGAC
((((((((((((..((.((((&))))..))..))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025146
GeneSymbolNAA50
Binding site5327,5353
Score0.846
Seed1
Au0.441
Energy-22.4
Binding len26
Me-6.084
Phylopstem3.1725432000000002
Phylopflank4.462089937499998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure