Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCAACCCAGCTGACAAT
(((((((((.(((((...(((&))).))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025150
GeneSymbolTARS2
Binding site2249,2269
Score0.923
Seed1
Au0.426
Energy-21.1
Binding len20
Me-5.413
Phylopstem-0.3460419
Phylopflank-0.18565653375000002
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end5
Position3UTR
2D Structure