Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTACAACCCAGTGCC
..(((.(((.((((((.((((&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025153
GeneSymbolATP10B
Binding site5548,5565
Score1.0
Seed0
Au0.544
Energy-19.9
Binding len17
Me-8.1
Phylopstem4.365273333333334
Phylopflank4.67642584375
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure