Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCAGCTGCAGCTCTCCCAGCTGCACGAGCAAT
(((((((((((((((((.(((&))).)))))))))))))...............)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025158
GeneSymbolRUFY1
Binding site1609,1646
Score1.0
Seed1
Au0.441
Energy-25.9
Binding len37
Me-3.938
Phylopstem1.0188940656250003
Phylopflank2.5283169662500002
Longest consecutive pairings13
Position of longest consecutive pairings20
Pairings in 3prime end7
PositionCDS
2D Structure