Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCGGCCGCAGCCCCTGCAC
.(((((((((((((((..(((&))))))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025161
GeneSymbolFAAP100
Binding site2931,2953
Score0.846
Seed1
Au0.324
Energy-25.3
Binding len22
Me-3.793
Phylopstem-0.5387838666666666
Phylopflank1.4704001299999998
Longest consecutive pairings14
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure