Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAACTGCATGCCCAGCAGCTGCT
..(((((((((((((((.((.&))...)))).)))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025164
GeneSymbolSIK3
Binding site1683,1707
Score0.846
Seed1
Au0.353
Energy-22.0
Binding len24
Me-4.957
Phylopstem-0.1420279333333333
Phylopflank-0.0983334625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure