Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&AGCCAAAGAGGAGCTGGC
..(((((((((((.(((.(...&).))).))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330782
GeneSymbolPBX3
Binding site878,896
Score0.923
Seed1
Au0.456
Energy-21.2
Binding len18
Me-5.814
Phylopstem7.025161818181818
Phylopflank6.462767572499998
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure