Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCAGGAGCAGCTGCAGG
((((((((((..((((.((((&))))))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025176
GeneSymbolNINL
Binding site2162,2183
Score0.923
Seed1
Au0.294
Energy-26.0
Binding len21
Me-10.109
Phylopstem-0.317305459
Phylopflank-0.489245883625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure