Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGAGCAGCAGCTGCC
..((((((((.(((.(.((((&))))).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025176
GeneSymbolNINL
Binding site206,225
Score0.846
Seed1
Au0.382
Energy-22.9
Binding len19
Me-8.517
Phylopstem-0.1298505875
Phylopflank-0.16245652374999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure