Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCATGGGGTCAGGTG
(((((((.....(((((((...&)))))))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_025179
GeneSymbolPLXNA2
Binding site9724,9742
Score0.846
Seed1
Au0.368
Energy-18.7
Binding len18
Me-14.722
Phylopstem2.308243
Phylopflank4.048819345
Longest consecutive pairings7
Position of longest consecutive pairings11
Pairings in 3prime end5
Position3UTR
2D Structure