Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TACATTGTATGTGCACAGGA
.((((((((((((((((.....&))))))))))))...)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_025181
GeneSymbolSLC35F5
Binding site5563,5583
Score0.846
Seed1
Au0.721
Energy-20.0
Binding len20
Me-3.793
Phylopstem-0.21998517547368424
Phylopflank0.21379299497500007
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end3
Position3UTR
2D Structure