Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGTGACCGGCCCGTGTGCCAGGA
.((((((((((...........&.)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_025188
GeneSymbolTRIM45
Binding site1161,1186
Score0.923
Seed1
Au0.382
Energy-19.4
Binding len12
Me-10.255
Phylopstem1.012676171
Phylopflank0.35108854074999996
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure