Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGATGACGTGGTGGCCGGGG
.((((((.(((.((((......&.)))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_025194
GeneSymbolITPKC
Binding site1124,1144
Score0.846
Seed1
Au0.338
Energy-16.9
Binding len16
Me-9.454
Phylopstem1.8305745
Phylopflank2.6099301412500004
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure