Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAGCCCAGGGAACGGCTATATCGGGCCCAGCTGGAGG
((.((((((.((((((((((.&))))))))))......................)))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025201
GeneSymbolPLEKHO2
Binding site1306,1348
Score1.0
Seed0
Au0.382
Energy-22.5
Binding len42
Me-6.738
Phylopstem0.34143
Phylopflank2.0158157249999995
Longest consecutive pairings10
Position of longest consecutive pairings32
Pairings in 3prime end7
PositionCDS
2D Structure