Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAAAGCCAGCCCCTCCTCCCACCTATTCTGAGTAGCTGCAGA
((((((((((((((...((((&))))...))))........................)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025201
GeneSymbolPLEKHO2
Binding site2036,2082
Score0.846
Seed1
Au0.397
Energy-21.1
Binding len46
Me-4.906
Phylopstem-0.2117393
Phylopflank0.10407286124999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure